Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
vasnVasorin b. (694 aa)    
Predicted Functional Partners:
LOC103462918
Ig-like domain-containing protein.
   
 
 0.585
traf7
TNF receptor-associated factor 7.
    
 0.546
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.540
ntng1
Netrin g1a.
   
 0.525
LOC103479750
Vav 3 guanine nucleotide exchange factor b.
   
 0.525
ENSPREP00000010333
RNA_pol_Rbc25 domain-containing protein.
      
 0.523
LOC103478925
Neuropilin (NRP) and tolloid (TLL)-like 1.
   
  
 0.509
neto1
Neuropilin (NRP) and tolloid (TLL)-like 1, like.
   
  
 0.509
fam151b
Family with sequence similarity 151 member B.
    
 
 0.505
chchd7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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