STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cnga4Cyclic nucleotide gated channel subunit alpha 4. (714 aa)    
Predicted Functional Partners:
LOC103482329
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.849
LOC103482304
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.846
ENSPREP00000001490
Si:dkey-44k1.5.
  
0.842
cngb1
Cyclic nucleotide gated channel beta 1a.
  
0.839
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
  
 
0.563
LOC103471015
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.558
LOC103467465
Cyclic nucleotide gated channel subunit alpha 1a.
  
  
 
0.558
ENSPREP00000026286
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.558
ENSPREP00000031276
Cyclic nucleotide gated channel alpha 2b.
  
  
 
0.558
LOC103460308
Cyclic nucleotide gated channel subunit alpha 1b.
  
  
 
0.556
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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