STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464866Fibromodulin a. (349 aa)    
Predicted Functional Partners:
LOC103475119
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.942
tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.934
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.931
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.931
LOC103467543
Fibromodulin b.
  
  
 
0.902
ENSPREP00000006071
Fin bud initiation factor b.
   
    0.852
ENSPREP00000021150
Fin bud initiation factor a.
   
    0.852
lrr1
Zgc:77287.
  
   
 0.760
acan
Aggrecan b.
    
 0.753
bgn
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
  
 
0.699
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.