ENSPREP00000005674 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000005674

Uncharacterized protein. (502 aa)

Predicted Functional Partners:

utrn

0.900

ENSPREP00000005618

0.899

dmd

0.899

drp2

0.885

ENSPREP00000025758

0.784

dag1

0.784

dtnb

0.779

sntg1

0.776

ENSPREP00000021455

0.772

ENSPREP00000013027

0.752

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000005618	ENSPREP00000005674	ENSPREP00000005618	ENSPREP00000005674	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000005618	ENSPREP00000013027	ENSPREP00000005618	ENSPREP00000013027	Uncharacterized protein.	Dystrobrevin, alpha.	0.696
ENSPREP00000005618	ENSPREP00000025758	ENSPREP00000005618	ENSPREP00000025758	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.784
ENSPREP00000005618	dag1	ENSPREP00000005618	ENSPREP00000031725	Uncharacterized protein.	Dystroglycan 1.	0.784
ENSPREP00000005618	drp2	ENSPREP00000005618	ENSPREP00000016814	Uncharacterized protein.	Dystrophin related protein 2.	0.801
ENSPREP00000005618	dtnb	ENSPREP00000005618	ENSPREP00000021131	Uncharacterized protein.	Dystrobrevin.	0.690
ENSPREP00000005618	sntg1	ENSPREP00000005618	ENSPREP00000012491	Uncharacterized protein.	Syntrophin, gamma 1.	0.776
ENSPREP00000005618	utrn	ENSPREP00000005618	ENSPREP00000005306	Uncharacterized protein.	Uncharacterized protein.	0.892
ENSPREP00000005674	ENSPREP00000005618	ENSPREP00000005674	ENSPREP00000005618	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000005674	ENSPREP00000013027	ENSPREP00000005674	ENSPREP00000013027	Uncharacterized protein.	Dystrobrevin, alpha.	0.752
ENSPREP00000005674	ENSPREP00000021455	ENSPREP00000005674	ENSPREP00000021455	Uncharacterized protein.	Microtubule actin crosslinking factor 1b.	0.772
ENSPREP00000005674	ENSPREP00000025758	ENSPREP00000005674	ENSPREP00000025758	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.784
ENSPREP00000005674	dag1	ENSPREP00000005674	ENSPREP00000031725	Uncharacterized protein.	Dystroglycan 1.	0.784
ENSPREP00000005674	dmd	ENSPREP00000005674	ENSPREP00000021787	Uncharacterized protein.	Dystrophin.	0.899
ENSPREP00000005674	drp2	ENSPREP00000005674	ENSPREP00000016814	Uncharacterized protein.	Dystrophin related protein 2.	0.885
ENSPREP00000005674	dtnb	ENSPREP00000005674	ENSPREP00000021131	Uncharacterized protein.	Dystrobrevin.	0.779
ENSPREP00000005674	sntg1	ENSPREP00000005674	ENSPREP00000012491	Uncharacterized protein.	Syntrophin, gamma 1.	0.776
ENSPREP00000005674	utrn	ENSPREP00000005674	ENSPREP00000005306	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSPREP00000013027	ENSPREP00000005618	ENSPREP00000013027	ENSPREP00000005618	Dystrobrevin, alpha.	Uncharacterized protein.	0.696
ENSPREP00000013027	ENSPREP00000005674	ENSPREP00000013027	ENSPREP00000005674	Dystrobrevin, alpha.	Uncharacterized protein.	0.752