STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478984Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (834 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.935
ENSPREP00000015831
Uncharacterized protein.
    
 
 0.789
ENSPREP00000015870
Uncharacterized protein.
    
 
 0.789
ENSPREP00000015917
EH domain-containing protein.
    
 
 0.789
itsn2
Intersectin 2a.
    
 
 0.789
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.763
LOC103480908
Uncharacterized protein.
   
 0.707
sh3gl2
SH3 domain containing GRB2 like 2a, endophilin A1.
   
 0.707
sh3gl1
SH3-domain GRB2-like 1b.
   
 0.707
snx9
Sorting nexin 9b.
    
 0.678
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.