STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005683Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.992
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.992
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.984
trappc8
Trafficking protein particle complex 8.
   
 0.983
trappc2l
Trafficking protein particle complex 2-like.
    
 0.982
trappc6a
Trafficking protein particle complex 6b-like.
    
 0.978
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.973
trappc9
Trafficking protein particle complex 9.
   
 0.966
trappc2
Trafficking protein particle complex 2.
    
 0.965
trappc10
Trafficking protein particle complex 10.
 
   
  0.952
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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