STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462205Multiple C2 domains, transmembrane 2b. (869 aa)    
Predicted Functional Partners:
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
      
 0.602
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
      
 0.593
ENSPREP00000015831
Uncharacterized protein.
     
 0.546
ENSPREP00000015870
Uncharacterized protein.
     
 0.546
ENSPREP00000015917
EH domain-containing protein.
     
 0.546
itsn2
Intersectin 2a.
     
 0.546
syk
Tyrosine-protein kinase.
      
 0.503
onecut2
One cut domain family member.
      
 0.488
LOC103462201
Solute carrier organic anion transporter family member.
      
 0.470
LOC103466636
Solute carrier organic anion transporter family member.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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