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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005699Transmembrane protein 126A. (200 aa)    
Predicted Functional Partners:
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.767
ecsit
ECSIT signalling integrator.
     
 0.743
acadvl
Acyl-CoA dehydrogenase very long chain.
   
 
 0.667
acad9
Acyl-CoA dehydrogenase family, member 9.
   
 
 0.667
LOC103470362
Uncharacterized protein.
   
 
 0.584
ndufb6
NADH:ubiquinone oxidoreductase subunit B.
   
 
 0.580
dhrs7
Dehydrogenase/reductase (SDR family) member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.549
opa3
Outer mitochondrial membrane lipid metabolism regulator OPA3.
      
 0.549
mettl17
Methyltransferase like 17.
      
 0.544
tmub1
Transmembrane and ubiquitin-like domain containing 1.
      
 0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.