STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005706Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
LOC103458635
Zgc:154055.
   
 0.777
mtmr9
Myotubularin related protein 9.
   
0.777
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.525
synj1
Synaptojanin 1.
   
 0.474
MTMR4
Myotubularin related protein 4.
    
 0.465
mtmr3
Myotubularin related protein 3.
    
 0.465
LOC103480150
Myotubularin related protein 1a.
 
 
 0.430
mtm1
Myotubularin 1.
 
 
 0.430
mtmr2
Myotubularin related protein 2.
 
 
 0.430
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.