STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466900Troponin C type 2 (fast). (173 aa)    
Predicted Functional Partners:
LOC103468062
Troponin C type 1b (slow).
  
 
 
0.953
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
   
 0.946
LOC103465645
Troponin I2, fast skeletal type.
   
 0.945
ENSPREP00000002982
Troponin I2, fast skeletal type.
   
 0.945
LOC103465646
Troponin I2, fast skeletal type.
   
 0.945
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
0.945
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.919
LOC103481362
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.919
LOC103466898
Si:rp71-17i16.4.
  
  
 
0.901
LOC103464710
Troponin I type 1b (skeletal, slow).
   
 0.886
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.