STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460601Heme oxygenase 2b. (316 aa)    
Predicted Functional Partners:
blvra
Biliverdin reductase A.
     
 0.952
blvrb
Biliverdin reductase B.
    
 0.938
LOC103481650
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
     
 0.902
LOC103482232
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.901
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.766
fxn
Frataxin.
     
 0.730
LOC103466498
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
  
 
 0.718
LOC103462393
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
  
 
 0.718
ENSPREP00000018380
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
  
 
 0.717
LOC103475683
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
     
 0.683
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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