STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459260Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.901
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.890
rmnd5b
Required for meiotic nuclear division 5 homolog B.
   
 
 0.888
armc8
Armadillo repeat containing 8.
   
 
 0.888
wdr26
WD repeat domain 26b.
   
 
 0.872
maea
Macrophage erythroblast attacher.
    
 
 0.842
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.841
LOC103465053
Ubiquitin-like modifier activating enzyme 3.
    
 0.841
LOC103464541
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
    
 0.832
uba6
Ubiquitin like modifier activating enzyme 6.
    
 0.832
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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