STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466325G protein-coupled receptor 22b. (439 aa)    
Predicted Functional Partners:
RELL1
RELT like 1.
    
 
 0.493
bcap29
Uncharacterized protein.
      
 0.483
dus4l
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
      
 0.475
c9orf72
Zgc:100846.
  
     0.474
LOC103481587
G protein-coupled receptor 142.
      
 0.467
COG5
Component of oligomeric golgi complex 5.
     
 0.463
kbtbd3
Kelch repeat and BTB (POZ) domain containing 3.
  
  
  0.439
tmem237
Transmembrane protein 237b.
  
 
  0.418
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.410
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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