STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
piggPhosphatidylinositol glycan anchor biosynthesis class G. (968 aa)    
Predicted Functional Partners:
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.999
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.987
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
    
 0.974
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
   
0.970
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.956
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
   
 0.936
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
   
 0.931
tmed10
Transmembrane p24 trafficking protein 10.
    
 
 0.893
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
 0.863
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
    
 
 0.855
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.