STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrna1Cholinergic receptor, nicotinic, alpha 1 (muscle). (429 aa)    
Predicted Functional Partners:
LOC103467111
Uncharacterized protein.
  
0.830
LOC103475776
Cholinergic receptor, nicotinic, epsilon.
  
0.798
chrnb1
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
0.791
LOC103462695
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
0.785
LOC103480586
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
0.784
chrng
Cholinergic receptor, nicotinic, gamma.
   
0.777
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.744
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
  
0.692
LOC103471384
Cholinergic receptor, nicotinic, beta 3b (neuronal); Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.688
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
0.687
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.