STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473187Myotubularin related protein 7b. (381 aa)    
Predicted Functional Partners:
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.924
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.921
inpp4b
Inositol polyphosphate-4-phosphatase type II B.
     
 0.911
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.904
LOC103473821
Inositol polyphosphate-4-phosphatase type I Ab.
     
 0.904
LOC103472490
Si:dkey-266f7.9.
     
  0.900
LOC103458635
Zgc:154055.
   
 0.835
mtmr9
Myotubularin related protein 9.
   
 0.835
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.736
pip4p2
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
   
 0.714
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.