STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103461256Syntaxin binding protein 5-like. (407 aa)    
Predicted Functional Partners:
Stxbp5l
WD_REPEATS_REGION domain-containing protein.
 
   
  0.929
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.888
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.852
snap29
Synaptosome associated protein 29.
    
 0.852
STX19
Syntaxin 19.
    
 0.806
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
    
 0.752
ENSPREP00000029685
Syntaxin 12.
    
 0.752
stx1a
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.745
LOC103469661
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.745
STX11
Syntaxin 11.
    
 0.745
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.