STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469842Matrix metallopeptidase 11a. (467 aa)    
Predicted Functional Partners:
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 0.703
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.703
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.659
LOC103468846
TIMP metallopeptidase inhibitor 2b.
   
 0.565
LOC103481516
TIMP metallopeptidase inhibitor 2a.
   
 0.565
LOC103474778
Matrix metallopeptidase 13b.
  
 
0.542
LOC103474776
Matrix metallopeptidase 20a (enamelysin).
   
  0.484
LOC103474777
Matrix metallopeptidase 20b (enamelysin).
   
  0.484
mmp2
Matrix metallopeptidase 2.
   
  0.484
LOC103461519
ZnMc domain-containing protein.
   
  0.484
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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