Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005814A kinase (PRKA) anchor protein 12b. (1314 aa)    
Predicted Functional Partners:
ENSPREP00000030871
Uncharacterized protein.
      
 0.895
akap1
A kinase (PRKA) anchor protein 1b.
      
 0.735
ENSPREP00000024566
Uncharacterized protein.
      
 0.674
rhof
Ras homolog family member F.
     
  0.664
akap11
A kinase (PRKA) anchor protein 11.
      
 0.601
mov10l1
Uncharacterized protein.
      
 0.598
LOC103464680
Mov10 RISC complex RNA helicase a.
      
 0.598
mov10
Moloney leukemia virus 10b, tandem duplicate 1.
      
 0.598
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.597
LOC103466278
Family with sequence similarity 169 member B.
     
 0.584
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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