STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005826Vasodilator stimulated phosphoprotein b. (199 aa)    
Predicted Functional Partners:
LOC103462148
Uncharacterized protein.
   
 0.920
LOC103466442
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.912
LOC103462420
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.912
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.903
LOC103468785
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
 0.903
LOC103479663
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
     
 0.903
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.903
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.664
LOC103469372
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.664
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.664
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.