STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eml3EMAP like 3. (665 aa)    
Predicted Functional Partners:
LOC103461037
RAN binding protein 2.
   
 0.651
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.623
NEK9
NIMA related kinase 9.
   
 0.609
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.595
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.586
ENSPREP00000024188
Uncharacterized protein.
 
      0.575
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.536
bub3
BUB3 mitotic checkpoint protein.
   
 0.523
Bub1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.502
ENSPREP00000021048
BUB1 N-terminal domain-containing protein.
   
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.