STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Clg14h4orf48Si:dkeyp-75h12.5. (98 aa)    
Predicted Functional Partners:
tmem59l
Transmembrane protein 59-like.
   
  
 0.774
nell2
Neural EGFL like 2a.
   
 
 0.753
NELL1
Neural EGFL like 1.
   
 
 0.753
LOC103475119
Transforming growth factor beta; Belongs to the TGF-beta family.
    
   0.641
camk2n1
Calcium/calmodulin dependent protein kinase II inhibitor 1.
   
  
 0.451
ENSPREP00000004879
Matrix-remodelling associated 8b.
  
     0.406
ccdc85b
Coiled-coil domain containing 85B.
      
 0.406
LOC103476954
Dorsal root ganglia homeobox.
      
 0.406
hes1
Hairy-related 6.
      
 0.403
hes4
Hairy-related 9.
      
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.