STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005841DDE_3 domain-containing protein. (144 aa)    
Predicted Functional Partners:
cdyl
Chromodomain protein, Y-like.
   
 0.707
CDYL2
Chromodomain Y like 2.
   
 0.707
ENSPREP00000019065
Uncharacterized protein.
  
 
  0.560
ENSPREP00000029046
Uncharacterized protein.
  
 
  0.555
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.531
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.531
ENSPREP00000029780
Uncharacterized protein.
  
 
  0.528
ENSPREP00000027813
HTH_Tnp_Tc3_2 domain-containing protein.
  
 
  0.526
ENSPREP00000025324
HTH_38 domain-containing protein.
  
 
  0.523
ENSPREP00000001668
ANK_REP_REGION domain-containing protein.
    
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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