STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plekhm3Pleckstrin homology domain containing, family M, member 3. (817 aa)    
Predicted Functional Partners:
LOC103478740
Cyclin Y-like 1; Belongs to the cyclin family.
      
 0.670
ttll6
Tubulin tyrosine ligase-like family, member 6.
   
  
 0.608
dagla
Diacylglycerol lipase, alpha.
      
 0.602
c1qbp
Complement component 1, q subcomponent binding protein.
      
 0.593
lrrcc1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.589
ccnyl1
Cyclin Y like 1; Belongs to the cyclin family.
      
 0.580
idh1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
      
 0.503
ccny
Cyclin Y; Belongs to the cyclin family.
      
 0.494
LOC103479951
CYCLIN domain-containing protein; Belongs to the cyclin family.
      
 0.494
LOC103477775
Si:ch211-107n13.1.
      
 0.491
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.