STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem94Transmembrane protein 94. (1365 aa)    
Predicted Functional Partners:
fibp
Fibroblast growth factor (acidic) intracellular binding protein a.
    
 
 0.963
cdk5
Cyclin-dependent kinase 5.
    
   0.815
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.653
tmem161a
Transmembrane protein 161A.
      
 0.649
tmem97
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
      
 0.649
tmem178a
Transmembrane protein 178.
      
 0.602
slitrk2
SLIT and NTRK-like family, member 2.
      
 0.586
LOC103475866
Transmembrane protein 88 a.
      
 0.585
tmem88
Uncharacterized protein.
      
 0.585
ENSPREP00000017741
Uncharacterized protein.
   
  
 0.548
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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