STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (784 aa)    
Predicted Functional Partners:
LOC103461156
Plexin_cytopl domain-containing protein.
    
 0.618
LOC103467959
Plexin A2.
    
 0.618
plxna1
Sema domain-containing protein.
    
 0.609
LOC103466867
Plexin A1a.
    
 0.609
ENSPREP00000003007
Plexin_cytopl domain-containing protein.
    
 0.609
plxna4
Plexin A4.
    
 0.609
plxna2
Sema domain-containing protein.
    
 0.609
ENSPREP00000020773
Sema domain-containing protein.
    
 0.609
ENSPREP00000023056
Plexin_cytopl domain-containing protein.
    
 0.609
Plxnd1
Sema domain-containing protein.
    
 0.609
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.