STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tlk1Tousled-like kinase 1a. (715 aa)    
Predicted Functional Partners:
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 
 0.714
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 
 0.714
cabin1
Calcineurin binding protein 1.
    
 
 0.694
rnf17
Ring finger protein 17.
      
 0.554
LOC103470832
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.537
thsd7b
Thrombospondin, type I, domain containing 7Ba.
      
 0.503
tbccd1
TBCC domain containing 1.
      
 0.490
gins1
GINS complex subunit 1 (Psf1 homolog).
   
  
 0.486
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
    
   0.468
YTHDC2
YTH domain containing 2.
   
   0.465
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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