STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM53CFamily with sequence similarity 53 member C. (379 aa)    
Predicted Functional Partners:
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.707
zhx3
Zinc fingers and homeoboxes 3.
  
     0.481
LOC103477698
Uncharacterized protein.
   
  
 0.412
ENSPREP00000019111
Glucocorticoid induced 1a.
   
  
 0.412
bicral
BRD4 interacting chromatin remodeling complex associated protein like.
  
   
 0.409
LOC103475849
Uncharacterized protein.
  
   
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.