STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42Cell division cycle 42. (191 aa)    
Predicted Functional Partners:
LOC103465768
Par-6 family cell polarity regulator alpha.
    
 0.996
LOC103458433
Non-specific serine/threonine protein kinase.
   
 0.994
pak2
Non-specific serine/threonine protein kinase.
   
 0.994
PAK3
Non-specific serine/threonine protein kinase.
   
 0.993
was
WASP actin nucleation promoting factor a.
   
 0.988
wasl
WASP like actin nucleation promoting factor b.
   
 0.988
LOC103465991
WASP like actin nucleation promoting factor a.
   
 0.988
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.985
iqgap3
IQ motif containing GTPase activating protein 3.
   
 0.985
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.985
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.