STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005965Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
LOC103467244
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
     
 0.764
LOC103464035
Hexosyltransferase.
     
 0.753
LOC108165620
Uncharacterized protein.
      
 0.693
ENSPREP00000015327
Uncharacterized protein.
      
 0.670
LOC103474795
Uncharacterized protein.
    
 
 0.604
tmem131
Transmembrane protein 131.
      
 0.602
gmppb
GDP-mannose pyrophosphorylase B.
   
  
 0.601
LOC103463094
Transmembrane 4 L six family member 18.
      
 0.582
b3gnt5
Hexosyltransferase.
     
 0.562
LOC103464576
Peptidylprolyl isomerase.
    
 
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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