STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478992Uncharacterized protein. (749 aa)    
Predicted Functional Partners:
cul2
Cullin 2; Belongs to the cullin family.
    
 0.837
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.744
LOC103468942
Elongin B.
    
 
 0.565
ELOB
Elongin B.
    
 
 0.565
zyg11b
Zyg-11 homolog (C. elegans).
  
  
 
0.553
zswim5
Zinc finger, SWIM-type containing 5.
     
  0.540
zer1
Zyg-11 related, cell cycle regulator.
     
 
0.540
zswim8
Zinc finger, SWIM-type containing 8.
     
  0.540
appbp2
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
     
  0.540
ZSWIM6
Zinc finger SWIM-type containing 6.
     
  0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (36%) [HD]