STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000005981Uncharacterized protein. (828 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 
 0.913
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.905
LOC103469127
Aly/REF export factor.
    
 
 0.798
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.791
LOC103461081
Vir like m6A methyltransferase associated.
   
 
 0.778
virma
Uncharacterized protein.
   
 
 0.778
ENSPREP00000007854
Uncharacterized protein.
    
 
 0.773
LOC103480536
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.773
alyref
RRM domain-containing protein.
    
 
 0.612
ythdc1
YTH domain containing 1.
   
  
 0.600
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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