STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (638 aa)    
Predicted Functional Partners:
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.987
xbp1
X-box binding protein 1.
   
 0.909
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 
 0.876
canx
Calnexin.
   
 
 0.858
LOC103463800
Calmegin.
   
 
 0.839
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 
 0.751
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
   
 
 0.749
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.741
atf6
Activating transcription factor 6.
   
  
 0.738
txndc11
Thioredoxin domain containing 11.
   
 
 0.737
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.