STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466333BTB domain-containing protein; Belongs to the potassium channel family. (622 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.796
kcnip2
Kv channel interacting protein 2.
    
 0.641
LOC103475897
Uncharacterized protein.
    
 0.641
LOC103473704
Kv channel interacting protein 3b, calsenilin.
    
 0.641
KCNIP3
Potassium voltage-gated channel interacting protein 3.
    
 0.641
KCNIP1
Potassium voltage-gated channel interacting protein 1.
    
 0.641
KCNIP4
Potassium voltage-gated channel interacting protein 4.
    
 0.641
KCNIP2
Potassium voltage-gated channel interacting protein 2.
    
 0.641
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.597
rpl21
Ribosomal protein L21.
   
 0.584
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.