STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475975Prostaglandin reductase 1. (329 aa)    
Predicted Functional Partners:
hpgd
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.938
LOC103460018
Uncharacterized protein.
   
 0.938
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
   
 
 0.937
ASS1
Argininosuccinate synthase 1.
    
   0.610
arcn1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  
 0.450
LOC103466854
Zgc:56622.
   
 
 0.436
LOC103470380
Aldo-keto reductase family 1, member A1a (aldehyde reductase).
   
 
 0.436
LOC103459507
Aldo_ket_red domain-containing protein.
   
 
 0.436
LOC103459462
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
   
 
 0.436
LOC103459461
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 1.
   
 
 0.436
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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