STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103474747Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity. (203 aa)    
Predicted Functional Partners:
sntg1
Syntrophin, gamma 1.
      
 0.734
syt3
Synaptotagmin III.
      
 0.573
LOC103467834
Synaptotagmin VIa.
      
 0.573
syt10
Synaptotagmin X.
      
 0.573
LOC103477695
Thrombospondin, type I, domain containing 7Ab.
      
 0.568
LOC103471930
Thrombospondin, type I, domain containing 7Aa.
      
 0.568
thsd7b
Thrombospondin, type I, domain containing 7Ba.
      
 0.568
ENSPREP00000020159
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.556
LOC103467691
Peptidoglycan recognition protein 2.
   
 
 0.535
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.