STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462719Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
gcnt4
Si:dkeyp-87d8.8.
   
 
 0.621
heg1
Heart development protein with EGF-like domains 1.
     
 0.574
LOC103481314
Uncharacterized protein.
     
 0.574
ENSPREP00000033790
Uncharacterized protein.
     
 0.574
ENSPREP00000033771
Mucin 13b, cell surface associated.
     
 0.537
ENSPREP00000020104
Uncharacterized protein.
     
 0.525
blzf1
Basic leucine zipper nuclear factor 1.
      
 0.498
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.474
LOC103481270
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
      
 0.470
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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