STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PuraPurine-rich element binding protein Ab. (279 aa)    
Predicted Functional Partners:
LOC103480119
RNA binding motif protein 4.1.
    
 
 0.571
PURB
Purine rich element binding protein B.
   
   0.546
purb
Uncharacterized protein.
   
   0.546
e2f1
E2F transcription factor 1.
    
 
 0.544
adarb2
Adenosine deaminase RNA specific B2 (inactive).
      
 0.542
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
 
 0.532
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.522
rfc3
Replication factor C (activator 1) 3.
    
   0.519
LOC103478366
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
      
 0.516
cdk5
Cyclin-dependent kinase 5.
    
 
 0.487
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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