Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sestd1Uncharacterized protein. (96 aa)    
Predicted Functional Partners:
dact1
Uncharacterized protein.
    
 
 0.865
gps2
G protein pathway suppressor 2.
    
   0.790
ankrd40
Ankyrin repeat domain 40.
      
 0.601
supt20h
SPT20 homolog, SAGA complex component.
     
 0.600
LOC103481570
Uncharacterized protein.
    
 
 0.579
LOC103476755
Zinc finger, RAN-binding domain containing 1b.
    
 
 0.579
LOC103469793
SEC14-like lipid binding 8.
      
 0.536
LOC103463598
SEC14 like lipid binding 1.
      
 0.536
LOC103473217
SEC14-like lipid binding 7.
      
 0.536
ENSPREP00000023558
PRELI/MSF1 domain-containing protein.
      
 0.536
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.