STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccn4Cellular communication network factor 4a. (359 aa)    
Predicted Functional Partners:
LOC103472957
PVR cell adhesion molecule related 2 like.
      
 0.642
amh
Anti-Mullerian hormone.
   
  
 0.511
ADAM12
ADAM metallopeptidase domain 12.
      
 0.473
cilp2
Cartilage intermediate layer protein 2.
   
  
 0.473
ADAM12-2
ADAM metallopeptidase domain 12.
      
 0.473
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.422
map7
Si:ch73-217b7.1.
      
 0.422
LOC103476526
Cytochrome P450, family 17, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
  
 0.415
LOC103478252
Growth differentiation factor 6a.
   
  
 0.411
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.