Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bbox1Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1. (447 aa)    
Predicted Functional Partners:
LOC103479006
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
   
 0.950
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
   
 0.950
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
   
 0.934
aldh2
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
   
 0.934
LOC103475651
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.918
LOC103474340
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.918
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.914
cryl1
Crystallin, lambda 1.
  
 
 0.808
bbx
BBX high mobility group box domain containing.
      
 0.695
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
   0.672
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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