STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006091DH domain-containing protein. (227 aa)    
Predicted Functional Partners:
cdc42se1
CDC42 small effector 1.
      
 0.496
ect2l
Coiled-coil domain containing 28A.
     
 0.464
CDC42
Cell division cycle 42.
    
 0.448
LOC103465423
Cell division cycle 42.
    
 0.448
LOC103465141
Uncharacterized protein.
    
 0.417
RHOB
Ras homolog family member B.
    
 0.417
LOC103466989
Uncharacterized protein.
    
 0.417
LOC103464682
Ras homolog family member Ca.
    
 0.417
LOC103467136
Uncharacterized protein.
    
 0.417
LOC108165959
Uncharacterized protein.
    
 0.417
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.