STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103471051Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
    
   0.896
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.788
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.788
tmem260
Transmembrane protein 260.
      
 0.581
LOC103470450
Si:dkey-40c11.2.
    
 
 0.563
dbnl
Drebrin-like b.
    
 
 0.563
dbn1
Drebrin 1.
    
 
 0.563
shq1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
  
 0.511
ubox5
U-box domain containing 5.
      
 0.503
LOC103468963
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.