STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPM6AGlycoprotein M6Ab. (292 aa)    
Predicted Functional Partners:
grm8
Glutamate metabotropic receptor 8.
   
  
 0.609
LOC103479062
Eph receptor B3a.
      
 0.602
wasl
WASP like actin nucleation promoting factor b.
      
 0.602
ENSPREP00000021201
Uncharacterized protein.
   
 
 0.594
mbp
Myelin basic protein b.
   
 
 0.594
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.588
Fitm2
Fat storage inducing transmembrane protein 2.
    
   0.541
LOC103474694
Uncharacterized protein.
   
  
 0.526
LOC103465991
WASP like actin nucleation promoting factor a.
      
 0.501
cpe
Carboxypeptidase E.
   
  
 0.492
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.