STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
reep2Receptor expression-enhancing protein. (234 aa)    
Predicted Functional Partners:
LOC103458924
Receptor expression-enhancing protein.
    
 
 0.945
reep3
Receptor expression-enhancing protein.
    
 
 0.804
tubgcp4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.670
rab3gap2
RAB3 GTPase activating protein subunit 2 (non-catalytic).
      
 0.663
atl1
Atlastin GTPase 1.
   
 
 0.660
arl6ip1
ADP-ribosylation factor-like 6 interacting protein 1.
    
 
 0.653
LOC103472377
zf-3CxxC domain-containing protein.
     
 0.629
zfyve27
Zinc finger, FYVE domain containing 27.
    
 
 0.610
sgf29
SAGA complex associated factor 29.
    
 
 0.603
zzz3
Zinc finger, ZZ-type containing 3.
    
   0.600
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.