STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cplane2Ciliogenesis and planar polarity effector 2. (248 aa)    
Predicted Functional Partners:
wdpcp
WD repeat containing planar cell polarity effector.
    
 
 0.979
fuz
Fuzzy planar cell polarity protein.
    
 
 0.956
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
      
 0.917
ift27
Intraflagellar transport 27.
     
 0.901
rab23
RAB23, member RAS oncogene family.
    
 0.887
intu
Inturned planar cell polarity protein.
    
 0.879
arl13b
ADP-ribosylation factor-like 13b.
    
 0.869
spef1
Zgc:66426.
    
 0.709
srp9
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
   
  
 0.691
cdc20
Cell division cycle 20 homolog.
    
 0.689
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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