STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)    
Predicted Functional Partners:
Rxra
Retinoid X receptor, alpha a.
   
0.928
LOC103478548
Retinoid x receptor, beta b.
   
0.923
RXRB
Retinoid X receptor beta.
   
0.923
LOC103463575
Uncharacterized protein.
   
0.923
NCOA3
Nuclear receptor coactivator.
    
 0.849
ncoa1
Nuclear receptor coactivator 1.
    
 0.849
ncoa2
Nuclear receptor coactivator 2.
    
 0.849
ENSPREP00000027951
Uncharacterized protein.
    
 0.849
LOC103465576
Nuclear receptor coactivator 3.
    
 0.849
ncor2
Nuclear receptor corepressor 2.
    
 0.831
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.