STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006128Uncharacterized protein. (496 aa)    
Predicted Functional Partners:
RND1
Rho family GTPase 1.
    
 0.808
LOC103467313
Rho family GTPase 1b.
    
 0.538
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.515
crk
CRK proto-oncogene, adaptor protein.
    
 0.515
ENSPREP00000023825
SH2 domain-containing protein.
    
 0.515
rnd3
Rho family GTPase 3a.
    
 0.499
LOC103466075
Membrane associated guanylate kinase, WW and PDZ domain containing 2b.
    
   0.499
magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
    
   0.499
ift81
Intraflagellar transport 81 homolog.
    
 0.493
ift88
Intraflagellar transport 88 homolog.
   
 0.466
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.