STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edil3EGF-like repeats and discoidin I-like domains 3a. (533 aa)    
Predicted Functional Partners:
pros1
Protein S.
   
 0.683
mcfd2
Multiple coagulation factor deficiency 2.
     
 0.632
lman1
Lectin, mannose-binding, 1.
    
 0.614
ENSPREP00000003320
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.581
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.581
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 
 0.568
LOC103463228
Ceruloplasmin; Belongs to the multicopper oxidase family.
 
 
    0.559
ENSPREP00000030322
Uncharacterized protein.
    
 0.554
atp7a
ATPase copper transporting alpha.
  
 
 0.542
atp7b
ATPase copper transporting beta.
  
 
 0.542
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]