STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl14epADP-ribosylation factor-like 14 effector protein. (211 aa)    
Predicted Functional Partners:
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
 
 0.865
LOC103457816
Uncharacterized protein.
    
 
 0.865
atf7ip
Activating transcription factor 7 interacting protein.
    
 
 0.823
atf7ip2
Fibronectin type-III domain-containing protein.
    
 
 0.823
Suox
Sulfite oxidase.
      
 0.661
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.655
mpv17l
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.647
enosf1
Enolase superfamily member 1.
      
 0.647
LOC103478407
Uncharacterized protein.
      
 0.646
pdrg1
P53 and DNA-damage regulated 1.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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